PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN06806.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 358aa    MW: 39420.7 Da    PI: 4.5746
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN06806.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-102803201055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  KHN06806.1 280 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 320
                 9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.148270319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-14274335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-11276325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-12276329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.88E-12279324No hitNo description
PfamPF000101.1E-7280320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MEPVQLISEE WGSLCGFHTT EEADFMAQLF GCNTLVTEKH CGNTTLGFWP GHDESTIVAM  60
TDTNSNSYLP PNVTDTNFLC FSQGSSSSTD NSGNNIFSIT SSGAYSCDPE ANFDSVSMVL  120
CLGDAKFSPH SFQCDDNSSQ QINENTDEES SLDPWKLAIA DNNLQAKREY EMMVSEPVEV  180
DRSRNLENLA KRLKSSIEVS KTLRSAKSGK NSKSASVSND EDDRSLSLQA QRNSCFSQSD  240
SNAYLEPNGG ASKDPAPPNL HRKSRATTGA ATDPQSLYAR KRRERINERL RILQNLVPNG  300
TKVDISTMLE EAVQYVKFLQ LQIKLLSSDD LWMYAPIAYN GINIGLDLSI SPTKGISM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351770.0AC235177.1 Glycine max strain Williams 82 clone GM_WBb0007H11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003535686.20.0PREDICTED: transcription factor bHLH85-like
TrEMBLA0A0B2PC180.0A0A0B2PC18_GLYSO; Transcription factor bHLH85
STRINGGLYMA10G40360.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-41bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]